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Biological Physics

Authors and titles for recent submissions

[ total of 29 entries: 1-25 | 26-29 ]
[ showing 25 entries per page: fewer | more | all ]

Fri, 1 Mar 2024

[1]  arXiv:2402.19225 [pdf, other]
Title: Deterministic Molecular Assembly with a Finite Set of Building Blocks: Universal Assembly Kits for Backbone-Assisted and Sequence-Directed Abstract Tile Assembly Models
Subjects: Biological Physics (physics.bio-ph); Combinatorics (math.CO)
[2]  arXiv:2402.19338 (cross-list from physics.optics) [pdf, other]
Title: 3D Super-resolution Optical Fluctuation Imaging with Temporal Focusing two-photon excitation
Comments: Comments Welcome. 8 pages 2 figures
Subjects: Optics (physics.optics); Biological Physics (physics.bio-ph)
[3]  arXiv:2402.19187 (cross-list from cond-mat.soft) [pdf, ps, other]
Title: Controlling polymer translocation with crowded medium and polymer length asymmetry
Subjects: Soft Condensed Matter (cond-mat.soft); Biological Physics (physics.bio-ph); Chemical Physics (physics.chem-ph); Computational Physics (physics.comp-ph)
[4]  arXiv:2402.19045 (cross-list from q-bio.PE) [pdf, other]
Title: Noise-induced survival resonances during fractional killing of cell populations
Subjects: Populations and Evolution (q-bio.PE); Biological Physics (physics.bio-ph)

Thu, 29 Feb 2024

[5]  arXiv:2402.18363 [pdf, other]
Title: Factors influencing the stability of the motor-clutch model on compliant substrates under external load
Comments: 16 pages, 14 figures
Subjects: Biological Physics (physics.bio-ph)
[6]  arXiv:2402.18100 [pdf, other]
Title: Direct and retrograde signal propagation in unidirectionally coupled Wilson-Cowan oscillators
Subjects: Biological Physics (physics.bio-ph)
[7]  arXiv:2402.17964 [pdf, other]
Title: Direct measure of DNA bending by quantum magnetic imaging of a nano-mechanical torque-balance
Subjects: Biological Physics (physics.bio-ph); Quantum Physics (quant-ph)
[8]  arXiv:2402.17796 [pdf, other]
Title: An Allosteric Model for the Influence of $\text{H}^+$ and $\text{CO}_2$ on Oxygen-Hemoglobin Binding
Subjects: Biological Physics (physics.bio-ph); Chemical Physics (physics.chem-ph); Biomolecules (q-bio.BM)
[9]  arXiv:2402.18103 (cross-list from q-bio.NC) [pdf, other]
Title: Neurological disorders leading to mechanical dysfunction of the esophagus: an emergent behavior of a neuromechanical dynamical system
Subjects: Neurons and Cognition (q-bio.NC); Biological Physics (physics.bio-ph)
[10]  arXiv:2402.17774 (cross-list from physics.med-ph) [pdf, ps, other]
Title: A paper-based multiplexed serological test to monitor immunity against SARS-CoV-2 using machine learning
Comments: 19 Pages, 4 Figures
Subjects: Medical Physics (physics.med-ph); Biological Physics (physics.bio-ph); Quantitative Methods (q-bio.QM)

Wed, 28 Feb 2024

[11]  arXiv:2402.17669 [pdf, other]
Title: Contractility-driven cell motility against a viscoelastic resistance
Comments: 5 pages, 4 figures
Subjects: Biological Physics (physics.bio-ph); Soft Condensed Matter (cond-mat.soft); Cell Behavior (q-bio.CB)
[12]  arXiv:2402.17326 [pdf, other]
Title: Bypass mechanism of F$_1$-ATPase for asymmetric enzyme kinetics
Comments: 6 pages, 5 figures + Supplementary Material (2 pages)
Subjects: Biological Physics (physics.bio-ph)
[13]  arXiv:2402.16883 [pdf, other]
Title: Impact of periodic vaccination in SEIRS seasonal model
Subjects: Biological Physics (physics.bio-ph)
[14]  arXiv:2402.17660 (cross-list from cs.LG) [pdf, other]
Title: TorchMD-Net 2.0: Fast Neural Network Potentials for Molecular Simulations
Subjects: Machine Learning (cs.LG); Biological Physics (physics.bio-ph); Chemical Physics (physics.chem-ph); Computational Physics (physics.comp-ph)
[15]  arXiv:2402.17252 (cross-list from q-bio.QM) [pdf, ps, other]
Title: tttrlib: modular software for integrating fluorescence spectroscopy, imaging, and molecular modeling
Authors: Thomas-Otavio Peulen (1,2,3,4), Katherina Hemmen (4), Annemarie Greife (5), Benjamin M. Webb (1,2,3), Suren Felekyan (5), Andrej Sali (1,2,3), Claus A. M. Seidel (5), Hugo Sanabria (6), Katrin G. Heinze (4) ((1) Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, (2) Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California, United States, (3) Quantitative Biosciences Institute (QBI), University of California, San Francisco, San Francisco, California, United States, (4) Rudolf Virchow Center for Integrative and Translational Bioimaging, University of Würzburg, Würzburg, Germany, (5) Chair of Molecular Physical Chemistry, Heinrich-Heine University, Düsseldorf, Germany, (6) Department of Physics & Astronomy, Clemson University, Clemson, United States)
Subjects: Quantitative Methods (q-bio.QM); Biological Physics (physics.bio-ph)
[16]  arXiv:2402.17175 (cross-list from physics.med-ph) [pdf, other]
Title: Assessment of Precision and Accuracy of Brain White Matter Microstructure using Combined Diffusion MRI and Relaxometry
Comments: 8 figures
Subjects: Medical Physics (physics.med-ph); Biological Physics (physics.bio-ph)
[17]  arXiv:2402.17033 (cross-list from cond-mat.soft) [pdf, other]
Title: Mechanics and wrinkling patterns of pressurized bent tubes
Comments: 5 pages, 4 figures
Subjects: Soft Condensed Matter (cond-mat.soft); Biological Physics (physics.bio-ph)
[18]  arXiv:2402.16881 (cross-list from physics.chem-ph) [pdf, other]
Title: Frequency-Dependent Vibronic Effects in Steady State Energy Transport
Comments: 22 pages, 4 figures
Subjects: Chemical Physics (physics.chem-ph); Biological Physics (physics.bio-ph); Quantum Physics (quant-ph)

Tue, 27 Feb 2024 (showing first 7 of 8 entries)

[19]  arXiv:2402.16747 [pdf, ps, other]
Title: Recent progress in the physical principles of dynamic ground self-righting
Authors: Chen Li
Comments: in review at Integrative & Comparative Biology. arXiv admin note: text overlap with arXiv:2304.04603 by other authors
Subjects: Biological Physics (physics.bio-ph); Systems and Control (eess.SY); Quantitative Methods (q-bio.QM)
[20]  arXiv:2402.16711 [pdf, other]
Title: Action potential propagation properties of a reduced Hodgkin-Huxley type model with ATP Na-K pumps
Comments: 8 pages, 12 figures
Subjects: Biological Physics (physics.bio-ph); Neurons and Cognition (q-bio.NC)
[21]  arXiv:2402.16556 [pdf, other]
Title: A brief tutorial on information theory
Comments: See also 2401.15538
Subjects: Biological Physics (physics.bio-ph); Molecular Networks (q-bio.MN); Neurons and Cognition (q-bio.NC)
[22]  arXiv:2402.16519 [pdf, ps, other]
Title: Microsecond Time-Resolved Cryo-Electron Microscopy
Authors: Ulrich J. Lorenz
Subjects: Biological Physics (physics.bio-ph)
[23]  arXiv:2402.15512 [pdf, ps, other]
Title: Formulation, Colloidal Characterization, and In Vitro Biological Effect of BMP-2 Loaded PLGA Nanoparticles for Bone Regeneration
Comments: 18 pages, 8 figures
Journal-ref: Pharmaceutics 2019, 11, 388
Subjects: Biological Physics (physics.bio-ph)
[24]  arXiv:2402.16151 (cross-list from cond-mat.soft) [pdf, ps, other]
Title: Experimental identification of force, velocity, and nematic order relationships in active nematic cell monolayers
Comments: 5 pages, 4 figures, Supplementary 14 pages, 11 figures
Subjects: Soft Condensed Matter (cond-mat.soft); Statistical Mechanics (cond-mat.stat-mech); Biological Physics (physics.bio-ph)
[25]  arXiv:2402.16010 (cross-list from cs.RO) [pdf, other]
Title: Energy-conserving intermittent-contact motion in complex models
Authors: Sergey Pankov
Comments: 27 pages, 6 figures
Journal-ref: Communications in Nonlinear Science and Numerical Simulation, 132 (2024), 107895
Subjects: Robotics (cs.RO); Biological Physics (physics.bio-ph); Classical Physics (physics.class-ph)
[ total of 29 entries: 1-25 | 26-29 ]
[ showing 25 entries per page: fewer | more | all ]

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